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Table 3 Summary of permutation (1000 times) ANOVA results [percentage of variance (%) accounted for, and the associated p values (< 0.05 highlighted in italics)] for alpha diversity

From: Effect of fungal, oomycete and nematode interactions on apple root development in replant soil

Indices

Treatment

 

Genotype

 

Interaction

 

Residual

 

%

p

%

p

%

p

%

Bacteria

 Chao1

2.31

0.640

1.61

0.935

7.08

0.773

85.40

 Shannon

12.47

0.005

7.03

0.025

2.87

0.999

74.14

 Simpson

14.47

 < 0.001

3.47

0.282

3.18

0.984

71.71

Fungi

 Chao1

6.64

0.189

4.47

0.135

3.90

0.973

77.74

 Shannon

3.21

0.480

12.89

 < 0.001

4.93

0.736

62.60

 Simpson

2.48

0.410

9.87

 < 0.001

5.08

0.679

66.40

Oomycetes

 Chao1

3.52

0.350

14.01

 < 0.001

6.76

0.576

64.55

 Shannon

9.27

0.004

3.37

0.303

9.64

0.390

68.63

 Simpson

10.49

0.005

3.37

0.163

8.92

0.500

68.62

Nematodes

 Chao1

7.54

0.059

8.07

0.028

6.92

0.788

66.22

 Shannon

14.40

 < 0.001

5.10

0.049

7.03

0.683

64.64

 Simpson

12.58

0.007

4.66

0.096

7.46

0.480

65.84

  1. ANOVA based on the rank of individual sample alpha diversity, treatment factors are the soil treatment and rootstock genotypes